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Machine learning software

 
  • Neural networks for ordinal regression and classification (Linux version). Download NNRank 1.0
     
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    Some bioinformatics software I developed from 2002 to 2006 at Dr. Pierre Baldi's group:

     
  • Protein secondary structure predictor. Download SSpro 4.0
     
  • Protein solvent accessibility predictor. Download ACCpro 4.0
     
  • Protein disulfide bond predictor. Download DIpro 2.0
     
  • Protein beta-sheet structure predictor. Download BETApro 1.0
     
  • Protein disordered region predictor. Download DISpro 1.0
     
  • Protein domain predictor. Download DOMpro 1.0
     
  • Prediction of stability changes of single site mutations from sequences. Download MUpro 1.0
     
  • Biological Network Simulation (collaboration with Dr. Mjolsness's group). Download SIGMOID

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